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020 _a9781493986668
024 7 _a10.1007/978-1-4939-8666-8
_2doi
040 _aES-MaUEC
_bspa
_cES-MaUEC
245 1 0 _aCopy Number Variants
_bMethods and Protocols
_cedited by Derek M. Bickhart.
250 _a1st edition 2018
264 1 _aNew York, NY
_bSpringer International Publishing
_c2018
300 _a1 recurso en línea (X, 206 páginas)
_b36 ilustraciones, 25 ilustraciones a color
336 _atexto
_btxt
_2rdacontent
337 _aelectrónico
_bc
_2rdamedia
338 _arecurso electrónico
_bcr
_2rdacarrier
347 _aarchivo de texto
_bPDF
490 0 _aMethods in Molecular Biology
_x1940-6029
_v1833
505 0 _aIdentification of Copy Number Variants from SNP Arrays using PennCNV -- Using SAAS-CNV to Detect and Characterize Somatic Copy Number Alterations in Cancer Genomes from Next Generation Sequencing and SNP Array Data -- Statistical Detection of Genome Differences Based on CNV Segment -- Whole Genome Shotgun Sequence CNV Detection using Read Depth -- Read Depth Analysis to Identify CNV in Bacteria using CNOGpro -- Using HaMMLET for Bayesian Segmentation of WGS read-depth Data -- Split-Read InDel and Structural Variant Calling Using PINDEL -- Detecting Small Inversions using SRinversion -- Detection of CNVs in NGS data using VS-CNV -- Structural Variant Breakpoint Detection with novoBreak -- Use of RAPTR-SV to Identify SVs from Read Pairing and Split Read Signatures -- Versatile Identification of Copy Number Variants with Canvas -- Analysis of Population-genetic Properties of Copy Number Variations -- Validation of Genomic Structural Variants through Long Sequencing Technologies -- Structural Variation Detection and Analysis using Bionano Optical Mapping.
520 _aThis volume offers detailed step-by-step instructions to allow beginners and experts alike to run appropriate copy number variants (CNV) detection software on a dataset of choice and discern between false positive noise and true positive CNV signals. Chapters guide readers through single nucleotide polymorphism (SNP) chips, optical mapping assembly techniques, and current open-source programs specializing in CNV detection. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Copy Number Variants: Methods and Protocols aims to provide guidance to Bioinformaticians and Molecular Biologists who are interested in identifying copy number variants (CNV) with a wide variety of experimental media.
700 1 _aBickhart, Derek M
_eeditor literario
_4edt
_4http://id.loc.gov/vocabulary/relators/edt
776 0 8 _iPrinted edition:
_z9781493986651
776 0 8 _iPrinted edition:
_z9781493986675
776 0 8 _iPrinted edition:
_z9781493993598
856 4 0 _uhttps://go.openathens.net/redirector/universidadeuropea.es?url=https://doi.org/10.1007/978-1-4939-8666-8
_z(usuarios Universidad Europea de Valencia)
942 _2lcc
_cLE
988 _aSpringer_Protocols_2018
999 _c233068
_d233068