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020 _a9781071610992
024 7 _a10.1007/978-1-0716-1099-2
_2doi
040 _aES-MaUEC
_bspa
_cES-MaUEC
245 1 0 _aBacterial Pangenomics
_bMethods and Protocols
_cedited by Alessio Mengoni, Giovanni Bacci, Marco Fondi.
250 _a2nd edition 2021
264 1 _aNew York, NY
_bSpringer International Publising
_c2021
300 _a1 recurso en línea (X, 268 páginas)
_b59 ilustraciones, 42 ilustraciones a color
336 _atexto
_btxt
_2rdacontent
337 _aelectrónico
_bc
_2rdamedia
338 _arecurso electrónico
_bcr
_2rdacarrier
347 _aarchivo de texto
_bPDF
490 0 _aMethods in Molecular Biology
_x1940-6029
_v2242
505 0 _aPacBio-Based Protocol for Bacterial Genomes Assembly -- The Illumina Sequencing Protocol and the NovaSeq 6000 System -- Comparative Analysis of Core and Accessory Genes in Co-Expression Network -- Inferring Core Genome Phylogenies for Bacteria -- Inferring Phylogenomic Relationship of Microbes Using Scalable Alignment-Free Methods -- Fast Phylogeny Reconstruction from Genomes of Closely Related Microbes -- Comparative Genomics, from the Annotated Genome to Valuable Biological Information: A Case Study -- Accurate Annotation of Microbial Metagenomic Genes and Identification of Core Sets -- Metagenomic Assembly: Reconstructing Genomes from Metagenomes -- Genome Recovery, Functional Profiling, and Taxonomic Classification from Metagenomes -- Functional Metagenomics for Identification of Antibiotic Resistance Genes (ARGs) -- Host Trait Prediction from High-Resolution Microbial Features -- Phylogenetic Methods for Genome-Wide Association Studies in Bacteria -- Simple, Reliable, and Time-Efficient Manual Annotation of Bacterial Genomes with MAISEN -- A Compendium of Bioinformatic Tools for Bacterial Pangenomics to Be Used by Wet-Lab Scientists -- A Protocol for Teaching Basic Next Generations Sequencing (NGS) Analysis Skills to Undergraduate Students Using Bash and R.
520 _aThis completely revised edition explores novel discoveries in bacterial genomic research, with a focus on technical and computational improvements as well as methods used for bacterial pangenome analysis, which relies on microbiome studies and metagenomic data. Beginning with up-to-date sequencing methods, the book continues with sections covering methods for deep phylogenetic analysis, the role of metagenomic data in understanding the genomics of the many yet uncultured bacteria, progress in genome-to-phenome inference, as well as computational genomic tools. Written for the highly successful Methods in Molecular Biology series, chapters include the type of practical detail necessary for reproducible results in the lab. Authoritative and up-to-date, Bacterial Pangenomics: Methods and Protocols, Second Edition serves as an ideal guide for both highly qualified investigators in bacterial genomics and for less experienced researchers, including students and teachers, who could use a reference for approaching genomic analysis and genome data.
700 1 _aMengoni, Alessio
_eeditor literario
_4edt
_4http://id.loc.gov/vocabulary/relators/edt
700 1 _aBacci, Giovanni
_eeditor literario
_4edt
_4http://id.loc.gov/vocabulary/relators/edt
700 1 _aFondi, Marco
_eeditor literario
_4edt
_4http://id.loc.gov/vocabulary/relators/edt
776 0 8 _iPrinted edition:
_z9781071610985
776 0 8 _iPrinted edition:
_z9781071611005
776 0 8 _iPrinted edition:
_z9781071611012
856 4 0 _uhttps://go.openathens.net/redirector/universidadeuropea.es?url=https://doi.org/10.1007/978-1-0716-1099-2
_z(usuarios Universidad Europea de Valencia)
942 _2lcc
_cLE
988 _aSpringer_Protocols_2021
999 _c233499
_d233499