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020 _a9781071615973
024 7 _a10.1007/978-1-0716-1597-3
_2doi
040 _aES-MaUEC
_bspa
_cES-MaUEC
245 1 0 _aEnhancers and Promoters
_bMethods and Protocols
_cedited by Tilman Borggrefe, Benedetto Daniele Giaimo.
250 _a1st edition 2021
264 1 _aNew York, NY
_bSpringer International Publising
_c2021
300 _a1 recurso en línea (XI, 376 páginas)
_b69 ilustraciones, 57 ilustraciones a color
336 _atexto
_btxt
_2rdacontent
337 _aelectrónico
_bc
_2rdamedia
338 _arecurso electrónico
_bcr
_2rdacarrier
347 _aarchivo de texto
_bPDF
490 0 _aMethods in Molecular Biology
_x1940-6029
_v2351
505 0 _aA New Toolbox to Analyze Enhancer-Promoter Functions -- Global Run-on Sequencing (GRO-Seq) -- Illuminating Enhancer Transcription at Nucleotide Resolution with Native Elongating Transcript Sequencing (NET-Seq) -- Low Quantity single strand CAGE (LQ-ssCAGE) Maps Regulatory Enhancers and Promoters -- Analyses of Promoter, Enhancer and Nucleosome Organisation in Mammalian Cells by MNase-Seq -- Measuring Chromatin Accessibility: ATAC-Seq -- High-resolution ChIP-MNase Mapping of Nucleosome Positions at Selected Genomic Loci And Alleles -- Sequential Chromatin Immunoprecipitation to Identify Heterotypic Nucleosomes -- Low Input Targeted Chromatin Capture (low-T2C) -- Proximity Ligation-assisted ChIP-Seq (PLAC-Seq) -- Analysis of Enhancer-promoter Interactions using CAGE and RADICL-Seq technologies -- Using Open Chromatin Enrichment and Network Hi-C (OCEAN-C) to identify open chromatin interactions -- Assessment of 3D Interactions Between Promoters and Distal Regulatory Elements with Promoter Capture Hi-C (PCHi-C) -- Native Chromatin Proteomics (N-ChroP) to Characterize Histone Post-Translational Modification (PTM) Combinatorics At Distinct Genomic Regions -- Using ChIP-SICAP to Identify Proteins That Co-Localize in Chromatin -- Genome-wide profiling of protein-DNA Interactions with Chromatin Endogenous Cleavage And High-Throughput Sequencing (ChEC-Seq) -- Transcriptional Activation Of Heterochromatin by Recruitment of dCas9 Activators -- Deletion of Regulatory Elements with All-in-One CRISPR-Cas9 Vectors -- Simultaneous Tagmentation-based detection of ChIP/ATAC Signal with Bisulfite Sequencing -- Low Input Whole-Genome Bisulfite Sequencing.
520 _aThis volume contains cutting-edge techniques to study the function of enhancers and promoters in depth. Chapters are divided into six sections and describe enhancer-promoter transcripts, nucleosome occupancy, DNA accessibility, chromatin interactions, protein-DNA interactions, functional analyses, and DNA methylation assays. Written in the Methods in Molecular Biology series format, chapters include comprehensive introductions, lists of the necessary materials and reagents, step-by-step laboratory protocols, and useful suggestions for troubleshooting. Authoritative and cutting-edge, Enhancers and Promoters: Methods and Protocols is a useful guide for future experiments. Chapters 4 and 11 are available open access under a Creative Commons Attribution 4.0 International License via link.springer.com.
700 1 _aBorggrefe, Tilman
_eeditor literario
_4edt
_4http://id.loc.gov/vocabulary/relators/edt
700 1 _aGiaimo, Benedetto Daniele
_eeditor literario
_4edt
_4http://id.loc.gov/vocabulary/relators/edt
776 0 8 _iPrinted edition:
_z9781071615966
776 0 8 _iPrinted edition:
_z9781071615980
776 0 8 _iPrinted edition:
_z9781071615997
856 4 0 _uhttps://go.openathens.net/redirector/universidadeuropea.es?url=https://doi.org/10.1007/978-1-0716-1597-3
_z(usuarios Universidad Europea de Valencia)
942 _2lcc
_cLE
988 _aSpringer_Protocols_2021
999 _c233515
_d233515