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020 _a9781493923922
024 7 _a10.1007/978-1-4939-2392-2
_2doi
040 _aES-MaUEC
_bspa
_cES-MaUEC
245 1 0 _aBacterial Transcriptional Control
_bMethods and Protocols
_cedited by Irina Artsimovitch, Thomas J. Santangelo.
250 _a1st edition 2015
264 1 _aNew York, NY
_bSpringer International Publishing
_c2015
300 _a1 recurso en línea (XI, 342 páginas)
_b48 ilustraciones, 25 ilustraciones a color
336 _atexto
_btxt
_2rdacontent
337 _aelectrónico
_bc
_2rdamedia
338 _arecurso electrónico
_bcr
_2rdacarrier
347 _aarchivo de texto
_bPDF
490 0 _aMethods in Molecular Biology
_x1940-6029
_v1276
505 0 _aMapping the Escherichia coli Transcription Elongation Complex with Exonuclease III -- Purification of Bacterial RNA Polymerase: Tools and Protocols -- Monitoring Translocation of Multisubunit RNA Polymerase Along the DNA with Fluorescent Base Analogues -- In vitro and in vivo Methodologies for Studying the Sigma54-dependent Transcription -- Methods for the Assembly and Analysis of in vitro Transcription-coupled-to-translation Systems -- Site-specific Incorporation of Probes into RNA Polymerase by Unnatural-amino-acid Mutagenesis and Staudinger-Bertozzi Ligation -- Reconstitution of Factor-dependent, Promoter Proximal Pausing in Drosophila Nuclear Extracts -- Direct Competition Assay for Transcription Fidelity -- Single-stranded DNA Aptamers for Functional Probing of Bacterial RNA Polymerase -- Biochemical Analysis of Transcription Termination by RNA Polymerase III from Yeast Saccharomyces cerevisiae -- Use of RNA Polymerase Molecular Beacon Assay to Measure RNA Polymerase Interactions with Model Promoter Fragments -- Preparation of cDNA Libraries for High-throughput RNA Sequencing Analysis of RNA 5' Ends -- In situ Footprinting of E. coli Transcription Elongation Complex with Chloroacetaldehyde -- Using Solutes and Kinetics to Probe Large Conformational Changes in the Steps of Transcription Initiation -- Manipulating Archaeal Systems to Permit Analyses of Transcription Elongation-termination Decisions in vitro -- Purification of Active RNA Polymerase I from Yeast -- Transcription in Archaea: preparation of Methanocaldococcus jannaschii Transcription Machinery -- Transcription in Archaea: in vitro Transcription Assays for mjRNAP -- Experimental Analysis of hFACT Action during Pol II Transcription in vitro -- ChIP-seq for Genome-scale Analysis of Bacterial DNA-binding Proteins.
520 _aThis volume is designed to be a resource of proven techniques and approaches for probing the activities of bacterial, eukaryotic, and archaeal RNA polymerases. This book features a collection of in vitro and in vivo technologies that will permit researchers to purify and probe the position and stability of RNA polymerase complexes at different points of the transcription cycle, analyze the various translocations and intermolecular movements associated with catalysis, define recruitment strategies, probe the roles of transcription factors in each stage of the cycle, highlight conserved and disparate fidelity mechanisms, analyze the resultant transcripts, and study coordination of the nascent mRNA synthesis by the RNA polymerase and mRNA translation by the ribosome. Written in the highly successful Methods of Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubles troubleshooting and avoiding known pitfalls. Practical and timely, Bacterial Transcriptional Controls: Methods and Protocols highlights the breadth and depth of techniques that are likely to continue shaping the transcription community in the future.
700 1 _aArtsimovitch, Irina
_eeditor literario
_4edt
_4http://id.loc.gov/vocabulary/relators/edt
700 1 _aSantangelo, Thomas J
_eeditor literario
_4edt
_4http://id.loc.gov/vocabulary/relators/edt
776 0 8 _iPrinted edition:
_z9781493923939
776 0 8 _iPrinted edition:
_z9781493923915
776 0 8 _iPrinted edition:
_z9781493954674
856 4 0 _uhttps://go.openathens.net/redirector/universidadeuropea.es?url=https://doi.org/10.1007/978-1-4939-2392-2
_z(usuarios Universidad Europea de Valencia)
942 _2lcc
_cLE
988 _aSpringer_Protocols_2015
999 _c234172
_d234172